Detailed information of piRNA piR-hsa-9
Go to: General Datasets Location Reference
General Information
Accession: DQ588378
Aliases:piR-55490 PIR192559 PIR192289 PIR192355 PIR192384 PIR192429 PIR192460 PIR192499 PIR192533 PIR192599 PIR192632 PIR192667 PIR192699 PIR192759 PIR192792 PIR192819 PIR192849 PIR192889 PIR192950 PIR193005 PIR193057 PIR193094 PIR193140 PIR49489
Number of Papers:4
1N/AN/A16751776small RNAtestis
2N/AN/A16751777small RNAtestis
3N/A1022313525small RNAepididymis
175GSM1584529425818294small RNAovary from 2nd trimester embryos
176GSM15845301025818294small RNAovary from 2nd trimester embryos
177GSM15845317125818294oxidized small RNAovary from 2nd trimester embryos
178GSM15845321225818294oxidized small RNAovary from 2nd trimester embryos
Location in hg19
23 best hit(s) with 0 mismatch(es) in hg19. RefSeq Gene RepeatMasker
Location 1chr15:100340382-100340412:-DNM1P46 NR_003260;
Location 2chr15:102292903-102292933:+
Location 3chr15:102293546-102293576:+
Location 4chr15:102293890-102293920:+
Location 5chr15:102294416-102294446:+
Location 6chr15:102294851-102294881:+
Location 7chr15:102295377-102295407:+
Location 8chr15:102295903-102295933:+
Location 9chr15:102296238-102296268:+
Location 10chr15:102296855-102296885:+
Hits not all shown! To search for more loci, you can Run Bowtie here or Blat in UCSC.
PubMed: 16751776
Girard A, Sachidanandam R, Hannon GJ, Carmell MA.
A germline-specific class of small RNAs binds mammalian Piwi proteins
Nature. 2006 Jul 13;442(7099):199-202.
PubMed: 16751777
Aravin A, Gaidatzis D, Pfeffer S, Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ, Kuramochi-Miyagawa S, Nakano T, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Tuschl T.
A novel class of small RNAs bind to MILI protein in mouse testes
Nature. 2006 Jul 13;442(7099):203-7.
PubMed: 22313525
Li Y, Wang HY, Wan FC, Liu FJ, Liu J, Zhang N, Jin SH, Li JY.
Deep sequencing analysis of small non-coding RNAs reveals the diversity of microRNAs and piRNAs in the human epididymis.
Gene. 2012 Apr 15;497(2):330-5.
PubMed: 25818294
Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.
Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Cell Rep. 2015 Mar 31;10(12):2069-82.