piRNA



Detailed information of piRNA piR-hsa-12
Go to: General Datasets Location Reference
General Information
Name:piR-hsa-12
Organism:Human
Sequence:TGGGAAGAAGAAGACACTCCTGGAGGAGTC
Length:30
Accession: DQ588479
Aliases:piR-55591 PIR192562 PIR192360 PIR192387 PIR192434 PIR192464 PIR192502 PIR192537 PIR192604 PIR192636 PIR192669 PIR192704 PIR192764 PIR192797 PIR192853 PIR192894 PIR192955 PIR193008 PIR193063 PIR193098 PIR193146 PIR193156 PIR49590
Number of Papers:2
Datasets
DatasetAccessionReadsPubMedMethodTissue
1N/AN/A16751776small RNAtestis
2N/AN/A16751777small RNAtestis
Location in hg19
21 best hit(s) with 0 mismatch(es) in hg19. RefSeq Gene RepeatMasker
Location 1chr15:102293611-102293641:+
Location 2chr15:102293955-102293985:+
Location 3chr15:102294481-102294511:+
Location 4chr15:102294916-102294946:+
Location 5chr15:102295442-102295472:+
Location 6chr15:102295968-102295998:+
Location 7chr15:102296303-102296333:+
Location 8chr15:102296920-102296950:+
Location 9chr15:102297446-102297476:+
Location 10chr15:102297875-102297905:+
Hits not all shown! To search for more loci, you can Run Bowtie here or Blat in UCSC.
Reference
PubMed: 16751776
Girard A, Sachidanandam R, Hannon GJ, Carmell MA.
A germline-specific class of small RNAs binds mammalian Piwi proteins
Nature. 2006 Jul 13;442(7099):199-202.
PubMed: 16751777
Aravin A, Gaidatzis D, Pfeffer S, Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ, Kuramochi-Miyagawa S, Nakano T, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Tuschl T.
A novel class of small RNAs bind to MILI protein in mouse testes
Nature. 2006 Jul 13;442(7099):203-7.