Download

To download piRNA data by piRBase name

Please paste the piRBase names you want to include,
or upload from file:

To download piRNA sequence of distinct organism

SpeciesGenome VersionDownload AddressMD5
Human hg19 Human piRNA v1.0 b029b7f6c4f5f4d9fbff4ffdf2c158fc
Human piRNA v2.0 (To be added) To be added
hg38 Human piRNA v2.0 (To be added) To be added
Mouse mm9 Mouse piRNA v1.0 87f44ec837c7d288df4456b013e48ea6
Mouse piRNA v2.0 (To be added) To be added
mm10 Mouse piRNA v2.0 (To be added) To be added
Rat rn4 Rat piRNA v1.0 63b16fb7a14f3e37fc0909debb41cb87
Rat piRNA v2.0 (To be added) To be added
rn6 Rat piRNA v2.0 (To be added) To be added
Fly dm3 D. melanogaster piRNA v1.0 0d5409704343ba77471e232084ca4631
D. melanogaster piRNA v2.0 (To be added) To be added
dm6 D. melanogaster piRNA v2.0 (To be added) To be added
Worm ce10 C. elegans piRNA v1.0 bc25053f4ecdce0fdf0392173d339e1b
C. elegans piRNA v2.0 (To be added) To be added
ce11 C. elegans piRNA v2.0 (To be added) To be added
Zebrafish danRer7 Zebrafish piRNA v1.0 29d4b6635597f35fc7c6065c653a3b0a
Zebrafish piRNA v2.0 (To be added) To be added
danRer11 Zebrafish piRNA v2.0 (To be added) To be added
Chicken galGal4 Chicken piRNA v1.0 b6190204108936b35e63a1b8d1e30938
Chicken piRNA v2.0 (To be added) To be added
galGal5 Chicken piRNA v2.0 (To be added) To be added
X.tropicalis xenTro3 X. tropicalis piRNA v1.0 6dca2076f25e8c4fc1f3793333bae44e
X. tropicalis piRNA v2.0 (To be added) To be added
xenTro9 X. tropicalis piRNA v2.0 (To be added) To be added
Silkworm B. mori piRNA v1.0 a781fbec96323c50b99d0747910fbc91
B. mori piRNA v2.0 (To be added) To be added

To download piRNA data of distinct organism

SpeciesDownload AddressMD5
HumanHuman Dataset v1.0cfee8f35fda13291e632d2c82892ff32
MouseMouse Dataset v1.011c337a8d1258b012375038c03389458
RatRat Dataset v1.026f0f2715d3925a0b905750a8d949e50
FlyD. melanogaster Dataset v1.033608281d7712dfdd4fc0b98f3c3a66d
WormC. elegans Dataset v1.023bbbc5140b1534a1a11b737c767b7bd
ZebrafishZebrafish Dataset v1.0d2709b4be4316a8c1d2f8101609b4ef8
ChichkenChicken Dataset v1.05cee2bd6a8a8bd5895b3e62920b36e0f
X. tropicalisX. tropicalis Dataset v1.00b9c1f38c4f185cff3a59c5e7af29533
SilkwormSilkworm Dataset v1.0f847ab55bcdbcf58c0ac16e54b00bb04

To download piRNA loci in the genome

SpeciesGenome VersionDownload AddressMD5
Human hg19 Human hg19 v1.0 34e6ad83745f692540862f757cbb0eeb
Human hg19 v2.0 (To be added) To be added
hg38 Human hg38 v2.0 (To be added) To be added
Mouse mm9 Mouse mm9 v1.0 7e31cce246e3529930a27a1fdcf13fab
Mouse mm9 v2.0 (To be added) To be added
mm10 Mouse mm10 v2.0 (To be added) To be added
Rat rn4 Rat rn4 v1.0 feff46645f6bf4e66397f3c6e57bf115
Rat rn4 v2.0 (To be added) To be added
rn6 Rat rn6 v2.0 (To be added) To be added
Fly dm3 D. melanogaster dm3 v1.0 a7000ad2e876eedaa72c686cf940152a
D. melanogaster dm3 v2.0 (To be added) To be added
dm6 D. melanogaster dm6 v2.0 (To be added) To be added
Worm ce10 C. elegans ce10 v1.0 c041f6bbff4a5630e03a1d5979daf19f
C. elegans ce10 v2.0 (To be added) To be added
ce11 C. elegans ce11 v2.0 (To be added) To be added
Zebrafish danRer7 Zebrafish danRer7 v1.0 847d7d7c4559c8bc2e6a3f8ecfb2dad6
Zebrafish danRer7 v2.0 (To be added) To be added
danRer11 Zebrafish danRer11 v2.0 (To be added) To be added
Chicken galGal4 Chicken galGal4 v1.0 607dc4596b20f11a35792b6e5de81a4e
Chicken galGal4 v2.0 (To be added) To be added
galGal5 Chicken galGal5 v2.0 (To be added) To be added
X.tropicalis xenTro3 X. tropicalis xenTro3 v1.0 20f773dbecf24065c357904a884cad78
X. tropicalis xenTro3 v2.0 (To be added) To be added
xenTro9 X. tropicalis xenTro9 v2.0 (To be added) To be added

To download repeat derived piRNA

SpeciespiRBase VersionDownload AddressMD5
Human v1.0 piR_hsa_LINE.txt.gz bd1fca7426aa0f66407058aea853443a
piR_hsa_LTR.txt.gz afa0a949c06496913c47e99815df9278
piR_hsa_SINE.txt.gz 030bd4056d25208c502893cf611750bf
piR_hsa_Satellite.txt.gz dae3928db0bc211cf06283ad5620f75a
Mouse v1.0 piR_mmu_LINE.txt.gz 52d44481d4ce8aa0a0943d955aeeb00a
piR_mmu_LTR.txt.gz 8653863fcfffae183378854323e76411
piR_mmu_SINE.txt.gz d48afdd526950052fe19ad1b90f75521
piR_mmu_Satellite.txt.gz b51d98aef78c380c255d0f9170b9d37d
Rat v1.0 piR_rno_LINE.txt.gz 76d6373be4a789da5e9aafaef17c585c
piR_rno_LTR.txt.gz aa8d836642b589767fc7a5af1c313953
piR_rno_SINE.txt.gz b861c02018fa582108172355042ce9fd
piR_rno_Satellite.txt.gz 0de5c9d7282b1d1accf950f80c473d1a
Fly v1.0 piR_dme_LINE.txt.gz fa0ce688b3d8dd565a01a037e1088b13
piR_dme_LTR.txt.gz 83b5b62c04e80011c7239d4458d27603
piR_dme_Satellite.txt.gz 3a3a8c557143ca1de2836d9081a29e2e
Worm v1.0 piR_cel_LINE.txt.gz a754bca2a8599253b31457791d89dc1c
piR_cel_LTR.txt.gz e29a67b86f79df2f871d05ca58ba6904
piR_cel_SINE.txt.gz f722e6723fcbffc6bc78fa8af911b474
piR_cel_Satellite.txt.gz d639c6e09dad6749275fe32967a23b95
Zebrafish v1.0 piR_dre_LINE.txt.gz 0c72444e58926503ac88ef2fb3a9de65
piR_dre_LTR.txt.gz 6c38e7c5d1d42133093ab4849810ae98
piR_dre_SINE.txt.gz 875c0d25994ce45e109fc436d20ffa44
piR_dre_Satellite.txt.gz 5ff1fa52f65be94e78f36dffc6483803
Chicken v1.0 piR_gga_LINE.txt.gz e9fcbd7196023cdb519e23b5a9a58f01
piR_gga_LTR.txt.gz 2ca420d29b74eac338a4aea884876227
piR_gga_SINE.txt.gz 9cd7ee38c80e25a907d0eaa279408333
piR_gga_Satellite.txt.gz 83551ca283e519cd5f2ae62edaa828ab
X.tropicalis v1.0 piR_xtr_LINE.txt.gz dbd56c654dcb3713c314e9b93048fa3a
piR_xtr_LTR.txt.gz 02d75e0c3b5882252a94bcf3d1ebf542
piR_xtr_SINE.txt.gz 62f7a9957a892b1ed34faaf29e229e0d
piR_xtr_Satellite.txt.gz aec3e08e181b77fae14dad5599fdeb9e

To download gene derived piRNA

SpeciespiRBase VersionDownload AddressMD5
Humanv1.0 piR_human_gene.txt.gz 8762a9c44e6b3c84b83a31f00ca12a56
Mousev1.0 piR_mouse_gene.txt.gz 6bd270a495f3b9c0e9fd064deb47ab67
Ratv1.0 piR_rat_gene.txt.gz b5041ea11d6cfaa8522959d5e258d647
Flyv1.0 piR_dme_gene.txt.gz 7c5f3c3b8a6ee1583d951e325475046e
Wormv1.0 piR_cel_gene.txt.gz b77d0e85f283737b3d21152d1f252bb9
Zebrafishv1.0 piR_dre_gene.txt.gz 80acc58bf9b2b735000f41755383c092
Chickenv1.0 piR_gga_gene.txt.gz 809e10033a303f600f5b1a82f5aa4c1a
X.tropicalisv1.0 piR_xtr_gene.txt.gz cb91329870f4fb3419d61fc8b669f4de

To download piRNA target data

SpeciespiRBase VersionDownload AddressMD5
Mousev1.0 Mouse Deadenylation Dataset acc845fcd9ef2cee326bf5068c44dd36
Flyv1.0 D. melanogaster Deadenylation Dataset 8c5b24c8d85065cbe1459b5f29fa8932